Publications |
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35. Farella, M.M., Barnes, M.L., Breshears, D.D., Mitchell, J., van Leeuwen, W.J., and R.E. Gallery. (2022). Evaluation of vegetation indices and imaging spectroscopy to estimate foliar nitrogen across disparate biomes. Ecosphere 13(3): e3922 doi: 10.1002/ecs2.3992
34. Lasso E., Matheus-Arbeláez P., Gallery R.E., Garzón-López C., Cruz M., Leon-Garcia I.V., Aragón L., Ayarza-Páez A. and J. Curiel Yuste. (2021) Homeostatic Response to Three Years of Experimental Warming Suggests High Intrinsic Natural Resistance in the Páramos to Warming in the Short Term. Frontiers in Ecology and Evolution 9:615006. doi: 10.3389/fevo.2021.615006 [link to pdf] 33. Farella, M.M., Breshears, D.D., and R.E. Gallery. (2020) Predicting drivers of collective soil function with woody plant encroachment in complex landscapes. JGR Biogeosciences doi.org/10.1029/2020JG005838 [link to pdf] 32. Dove, N.C., Arogyaswamy, K., Billings, S.A., Botthoff, J.K., Carey, C.J., Cisco, C., DeForest, J.L., Fairbanks, D., Fierer, N., Gallery, R.E. and Kaye, J.P., Lohse, K., Maltz, M., Mayorga, E., Pett-Ridge, J., Yang, W., Hart, S., and E. Aronson. (2020) Continental-scale patterns of extracellular enzyme activity in the subsoil: An overlooked reservoir of microbial activity. Environmental Research Letters doi.org/10.1088/1748-9326/abb0b3 31. Fairbanks, D., Shepard, C., Murphy, M., Rasmussen, C., Chorover, J., Rich, V., and R.E. Gallery. (2020) Depth and topographic controls on microbial activity in a recently burned sub-alpine catchment. Soil Biology and Biochemistry doi.org/10.1016/j.soilbio.2020.107844 [link to pdf] 30. Espinosa, N.J., Moore, D.J.P., Rasmussen, C., Fehmi, J.S., and R.E. Gallery. (2020) Woodchip and biochar amendments differentially influence microbial responses, but do not enhance plant recovery in disturbed semiarid soils. Restoration Ecology doi.org/10.1111/rec.13165 [link to pdf] 29. Fehmi, J.S., Rasmussen, C., and R.E. Gallery. (2020) Biochar and woodchip amendments alter restoration outcomes, microbial processes, and soil moisture in a simulated semi‐arid ecosystem. Restoration Ecology doi.org/10.1111/rec.13100 [link to pdf] 28. Karuki, S., Gallery, R.E., Sparks, J., Gimblett, R., and M. McClaran. (2020) Soil microbial activity is resistant to recreational camping disturbance in a Prosopis dominated semiarid savanna. Applied Soil Ecology 147, 103424. [link to pdf] 27. Redmond, M.D., Law, D.J., Field, J.P, Meneses, N., Carroll, C.J., Wion, A.P, Breshears, D.D., Cobb, N.S., Dietze, M.C., and R.E. Gallery. (2019) Targeting Extreme Events: Complementing Near-Term Ecological Forecasting With Rapid Experiments and Regional Surveys. Frontiers in Environmental Science 7, 183. [link to pdf] 26. Brewer, T.E., Aronson, E.L., Arogyaswamy, K., Billings, S.A., Botthoff, J.K., Campbell, A.N., Dove, N.C., Fairbanks, D., Gallery, R.E., Hart, S.C., Kaye, J., King, G., Logan, G., Lohse, K.A., Maltz, M.R., Mayorga, E., O’Neill, C., Owens, S.M., Packman, A., Pett-Ridge, J., Plante, A.F., Richter, D.D., Silver, W.L., Yang, W.H., and N. Fierer. (2019) Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons. mBio 10 (5) e01318-19. [link to pdf] 25. Lybrand, R., Auston, J.C., Fedenko, J., Gallery, R.E., Rooney, E., Schroeder, P.A., Zaharescu, D.G., and O. Qafoku. (2019) A coupled microscopy approach to assess the nano-landscape of weathering. Scientific Reports 9, 5377 nature.com/articles/s41598-019-41357-0 24. Taylor, M.J., Mannan, R.W., U’Ren, J.M., Garber, N.P., Gallery, R.E. and A.E. Arnold. (2019) Age-related variation in the oral microbiome of urban Cooper’s hawks (Accipiter cooperii) BMC Microbiology 19, 47 doi.org/10.1186/s12866-019-1413-y 23. Qafoku, O., Lybrand, R.A., Shutthanandan, V., Gallery, R.E., Austin, J.C., Schroeder, P.A., Fedenko, J., Rooney, E., and D.G. Zaharescu. (2019) A Correlative Bimodal Surface Imaging Method to Assess Hyphae-Rock Interactions. Microscopy and Microanalysis 25, 2436-2437 [link to pdf] 22. Shaffer, J.P., Zalamea, P.C., Sarmiento, C., Gallery, R.E., Dalling, J.W., Davis, A.E., Baltrus, D.A. and A.E. Arnold. (2018) Context-dependent and variable effects of endohyphal bacteria on interactions between fungi and seeds. Fungal Ecology 36, 117-127. [link to pdf] 21. Lybrand, R., Gallery, R.E., Trahan, N., and D.J.P. Moore. (2018) Disturbance Alters the Relative Importance of Topographic and Biogeochemical Controls on Microbial Activity in Temperate Montane Forests. Forests 9(2). 97. doi:10.3390/f9020097 20. Gebhardt, M., Rasmussen, C. Fehmi, J., and R.E. Gallery. (2017) Soil amendments alter plant biomass and soil microbial activity in a semi-desert grassland. Plant and Soil 419, 53-70. [link to pdf] 19. Araldi-Brondolo, S. J., Spraker, J., Shaffer, J. P., Woytenko, E. H., Baltrus, D. A., Gallery, R. E., and A.E. Arnold. (2017) Bacterial endosymbionts: master modulators of fungal phenotypes. The Fungal Kingdom 981-1004. [link to pdf] 18. Shaffer, J.P., Gallery, R.E., Baltrus, D.A., and A.E. Arnold. (2017) An Endohyphal Bacterium (Chitinophaga, Bacteroidetes) Influences Carbon- and Nitrogen-Source Use by Fusarium keratoplasticum (F. solani species complex, Nectriaceae) Frontiers in Microbiology 8: doi.org/10.3389/fmicb.2017.00350 [link to pdf] 17. Shaffer, J.P., Sarmiento, C., Zalamea, P.C., Gallery, R.E., Davis, A.E., Baltrus, D.A. and A.E. Arnold. (2016) Diversity, Specificity, and Phylogenetic Relationships of Endohyphal Bacteria in Fungi That Inhabit Tropical Seeds and Leaves. Frontiers in Ecology and Evolution 4: 116. doi.org/10.3389/fevo.2016.00116 [link to pdf] 16. Docherty, K., Borton, H., Espinosa, E., Gebhardt, M., Gil-Loaiza, J., Gutknecht, J.L.M., Maes, P.W., Mott, B.M., Parnell, J., Purdy, G., Rodrigues, P.A.P., Stannish, L., Walser, O., and R.E. Gallery. (2015) Key edaphic properties largely explain temporal and geographic variation in soil microbial communities across four biomes. PLoS ONE 10(11): e0135352. doi:10.1371/journal.pone.0135352 15. Rasmussen, C., Gallery, R.E., and J.S. Fehmi. (2015) Passive soil heating using an inexpensive infrared mirror design – a proof of concept. SOIL 1, 631-639. [link to pdf] 14. Rocca-Serra, P. Walls, R., Parnell, J., Gallery, R.E., Zheng, J., Sansone, S.A., and A. Gonzalez-Beltran. (2015) Modeling a Microbial Community and Biodiversity Assay with OBI and PCO OBO Foundry Ontologies: The Interoperability Gains of a Modular Approach. Database doi:10.1093/database/bau132 13. Field, J.P., Breshears, D.D., Law, D.J., López-Hoffman, L., Brooks, P.D., Chorover, J., Barron-Gafford, G.A., Gallery, R.E., Litvak, M.E., Lybrand, R., McIntosh, J., Meixner, T., Niu, G.Y., Papuga, S.A., Pelletier, J.D., Rasmussen, C.R., and P.A. Troch. (2015) A perspective on areas of emphasis for Critical Zone Services. Vadose Zone Journal doi:10.2136/vz2014.10.0142 12. Bagchi, R., Gallery, R.E., Gripenberg, S., Freckleton, R.P., Gurr, S.J., Narayan, L., Addis, C.E., and O.T. Lewis. (2014) Pathogens and insect herbivores drive rainforest plant diversity and composition. Nature 506: 85-88. [link to pdf] 11. Gripenberg, S., Bagchi, R., Gallery, R.E., Freckleton, R.P., Narayan, L., and O.T. Lewis. (2014) Insects and plant pathogens as agents of density-dependent seedling mortality: Field experiments with five Neotropical tree species. Oikos 123:185-193. [link to pdf] 10. Kao, R.H., Gibson, C.M., Gallery, R.E., Meier, C.L., Barnett, D.T., Docherty, K.M., Blevins, K.K., Travers, P.D., Azuaje, E., Springer, Y.P., Thibault, K.M., McKenzie, V.J., Keller, M., Alves, L.F., Hinckley, E.S., Parnell, J., and D. Schimel. (2011) NEON Terrestrial Field Observations: Designing Continental-Scale, Standardized Sampling. Ecosphere 3(12): 1-17 doi: 10.1890/ES12-00196.1 9. P. Yilmaz, R. Kottmann, D. Field, R. Knight, J.R. Cole, L. Amaral-Zettler, J.A. Gilbert, I. Karsch Mizrachi, A. Johnston, G. Cochrane, R. Vaughan, C. Hunter, J. Park, N. Morrison, P. Rocca-Serra, P. Sterk, M. Arumugam, M.J. Blaser, P. Bork, P. Chain, E.K. Costello, H. Huot Creasy, P. Dawyndt, T. DeSantis, N. Fierer, J. Fuhrman, Gallery, R.E. et al. (2011) Minimum Information about a MARKer gene Sequence (MIMARKS) and minimum information about and (x) sequence (MIxS) specifications. Nature Biotechnology 29:415-420. 8. Bagchi, R., Swinfield, T., Gallery, R.E., Lewis, O.T., Gripenberg, S., Narayan, L., and R.P. Freckleton. (2010) Testing the Janzen-Connell mechanism: pathogens cause overcompensating density dependence in a tropical tree. Ecology Letters 13:1262-1269. [link to pdf] 7. Gallery, R.E., Moore, D.J.P., and J.W. Dalling. (2010) Variation in susceptibility, tolerance, and timing of infection by seed pathogens in the neotropical tree genus, Cecropia. Journal of Ecology 98:147-155. [link to pdf] 6. U’Ren, J.M., Dalling, J.W., Gallery, R.E., Maddison, D.R., Davis, E.C., Gibson, C.M., and A.E. Arnold. (2009) Diversity, phylogenetic relationships, and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree. Mycological Research 113:432-449. [link to pdf] 5. Sanchez, E., Gallery, R.E., and J.W. Dalling. (2009) Importance of nurse logs as a substrate for the regeneration of pioneer tree species on Barro Colorado Island, Panama. Journal of Tropical Ecology 25: 429-437. [link to pdf] 4. Kluger, C.G., Dalling, J.W., Gallery, R.E., Sanchez, E., Weeks-Galindo, C. and A.E. Arnold. (2008) Prevalent host-generalism among fungi associated with seeds of four neotropical pioneer species. Journal of Tropical Ecology 24: 351-354. [link to pdf] 3. Gallery, R.E., Dalling, J.W., and A.E. Arnold. (2007) Diversity, host affinity, distribution of seed-infecting fungi: a case study with neotropical Cecropia. Ecology 88:582-588. [link to pdf] 2. Gallery, R.E., Dalling, J.W., Wolfe, B.T., and A.E. Arnold. (2007) The influence of seed source, habitat, and fungi on Cecropia seed survival in two neotropical forests. In: A.J. Dennis, R. Green, E.W. Schupp, and D.A. Westcott (eds.) Seed dispersal: Theory and its application in a changing world. CAB Intl. Press, Wallingford, UK. [link to pdf] 1. Husband, R., Herre, E.A., Turner, S.L.,. Gallery, R.E., and J.P.W. Young. (2002) Molecular diversity of arbuscular mycorrhizal fungi and patterns of host association over time and space in a topical forest. Molecular Ecology 11:2669-2678. link |
Technical Reports |
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Schimel D.S., Keller M., Berukoff S., Kao R., Loescher H., Powell H., Kampe T., Moore D.J.P., Gram W., Barnett, D., Gallery, R.E. et al. (2011) Science Strategy: Enabling Continental-Scale Ecological Forecasting. National Ecological Observatory Network pdf |